Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 EEF1DP4-201ENST00000446006 880 ntBASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 KRT18P3-201ENST00000451602 1288 ntBASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM42Q8IWZ5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM42Q8IWZ5 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 ACE3P-201ENST00000423435 1973 ntBASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 AL023775.1-201ENST00000454907 1746 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms