Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 AL133267.1-201ENST00000398220 340 ntBASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 AL162726.2-201ENST00000438986 1017 ntBASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 RN7SL837P-201ENST00000463010 287 ntBASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 AC132938.2-201ENST00000579188 680 ntBASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 AL591163.1-201ENST00000641757 987 ntBASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM48Q8IWZ4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 INTS4P2-202ENST00000614726 2019 ntBASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 AC097376.2-205ENST00000610159 5334 ntBASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 SOCS2P1-201ENST00000417727 557 ntBASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 IGHV3-72-202ENST00000621503 303 ntBASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 CU634019.7-201ENST00000624153 1185 ntBASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 FP236241.2-201ENST00000624906 1185 ntBASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 KRT8P22-201ENST00000562317 1415 ntBASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms