Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 AC025181.2-201ENST00000606994 802 ntBASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 AC073592.8-201ENST00000624126 511 ntBASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC83Q8IWF9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 AL121723.1-201ENST00000445194 1519 ntBASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 CICP14-201ENST00000629111 2732 ntBASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 AL133267.1-201ENST00000398220 340 ntBASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 CNN2P2-201ENST00000443536 909 ntBASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 CNN2P3-201ENST00000450201 906 ntBASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 AC074044.1-201ENST00000609673 707 ntBASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 AL136317.3-201ENST00000618497 906 ntBASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 AC007292.2-201ENST00000593524 1812 ntBASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC83Q8IWF9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 AC232323.1-201ENST00000540724 2099 ntBASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 REXO1L5P-201ENST00000622260 2098 ntBASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 MIR1233-2-201ENST00000408138 82 ntBASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 MIR1233-1-201ENST00000408722 82 ntBASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 AC004449.1-201ENST00000564240 433 ntBASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC83Q8IWF9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms