Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 AGAP7P-201ENST00000582299 2062 ntBASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 AGAP14-201ENST00000624701 2060 ntBASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC50Q8IVM0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 AC136604.1-201ENST00000418535 575 ntBASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 MTND6P24-201ENST00000440466 518 ntBASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 BANF1P1-201ENST00000553684 263 ntBASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 MIR3687-2-201ENST00000577708 61 ntBASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 MIR3687-1-201ENST00000614492 61 ntBASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 AC005252.3-201ENST00000623855 2258 ntBASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 AC007686.3-201ENST00000619017 3487 ntBASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 AC138969.2-201ENST00000532739 9932 ntBASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC50Q8IVM0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 AC093520.2-201ENST00000561830 333 ntBASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 AC010327.4-202ENST00000591484 748 ntBASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC50Q8IVM0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms