Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 PRORSD1P-202ENST00000563365 2154 ntBASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.38■□□□□ 0.21
NPAS4Q8IUM7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 TNRC18P3-201ENST00000441896 2691 ntBASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AC106794.1-201ENST00000506935 792 ntBASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AC022217.1-201ENST00000521069 738 ntBASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AC097724.1-201ENST00000609581 426 ntBASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AC091544.8-201ENST00000619490 361 ntBASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 FKBP4P6-201ENST00000457486 1332 ntBASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AC010491.1-201ENST00000563101 2797 ntBASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS4Q8IUM7 AP000593.2-201ENST00000542775 1433 ntBASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 DPM3-202ENST00000368399 517 ntBASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 AC011742.3-201ENST00000439053 820 ntBASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 RN7SL11P-201ENST00000471305 293 ntBASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 RN7SL720P-201ENST00000488178 304 ntBASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 IMP3P2-201ENST00000489760 475 ntBASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 AL645939.5-201ENST00000606834 243 ntBASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 AC100757.4-201ENST00000626934 759 ntBASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms