Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC19.03■□□□□ 0.64
COL23A1Q86Y22 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 AC078875.1-201ENST00000431907 724 ntBASIC19.02■□□□□ 0.64
COL23A1Q86Y22 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 AC018463.1-201ENST00000456674 917 ntBASIC19.02■□□□□ 0.64
COL23A1Q86Y22 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 RPL18AP3-201ENST00000462885 528 ntBASIC19.02■□□□□ 0.64
COL23A1Q86Y22 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 AC012313.1-201ENST00000593393 3059 ntBASIC19.02■□□□□ 0.64
COL23A1Q86Y22 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.02■□□□□ 0.64
COL23A1Q86Y22 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
COL23A1Q86Y22 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 AC011840.2-201ENST00000563063 1520 ntBASIC19.01■□□□□ 0.63
COL23A1Q86Y22 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 AL592076.1-201ENST00000424448 303 ntBASIC19.01■□□□□ 0.63
COL23A1Q86Y22 IDS-203ENST00000428056 1213 ntTSL 2 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 NDUFS6P1-201ENST00000485187 316 ntBASIC19.01■□□□□ 0.63
COL23A1Q86Y22 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 MIR6769A-201ENST00000617340 73 ntBASIC19.01■□□□□ 0.63
COL23A1Q86Y22 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COL23A1Q86Y22 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19■□□□□ 0.63
COL23A1Q86Y22 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19■□□□□ 0.63
COL23A1Q86Y22 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19■□□□□ 0.63
COL23A1Q86Y22 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL23A1Q86Y22 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19■□□□□ 0.63
COL23A1Q86Y22 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 AL022344.2-201ENST00000568976 968 ntBASIC19■□□□□ 0.63
COL23A1Q86Y22 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19■□□□□ 0.63
COL23A1Q86Y22 AL157813.1-201ENST00000612996 587 ntBASIC19■□□□□ 0.63
COL23A1Q86Y22 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms