Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC012044.1-201ENST00000603431 297 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 RNF146-211ENST00000609447 607 ntTSL 4 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 AC090164.2-201ENST00000611487 516 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 AC025262.2-201ENST00000623975 1056 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 AL603764.1-201ENST00000636452 321 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AL353637.1-201ENST00000451571 732 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 PLS3-210ENST00000626746 216 ntTSL 4 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AL645728.2-202ENST00000641679 227 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 KRT8P21-201ENST00000430398 1491 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 LRRC59-203ENST00000576448 1531 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AC055811.4-201ENST00000624039 1754 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 OR2K2-202ENST00000374428 1038 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 HPN-206ENST00000597419 1212 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AL132994.2-201ENST00000603120 687 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AL138725.1-201ENST00000407347 1314 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 PRORSD1P-202ENST00000563365 2154 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AC005324.6-201ENST00000587972 613 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 AC008805.1-201ENST00000590892 364 ntBASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS13BQ7Z7G8 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 RN7SKP175-201ENST00000408472 289 ntBASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 NSD1-211ENST00000511258 809 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 NAMA-206ENST00000605377 509 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 TBC1D3J-201ENST00000620719 1426 ntBASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC112693.3-201ENST00000624819 1983 ntBASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms