Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 MIR1202-201ENST00000408529 83 ntBASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 ACTBP11-201ENST00000436287 1126 ntBASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
UBE3BQ7Z3V4 AC136621.1-201ENST00000624017 2304 ntBASIC19.14■□□□□ 0.66
UBE3BQ7Z3V4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 RN7SL48P-201ENST00000579283 293 ntBASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 AC006453.4-201ENST00000636949 1252 ntBASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 AC087481.3-201ENST00000602886 1894 ntBASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.14■□□□□ 0.65
UBE3BQ7Z3V4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 RPL13AP20-201ENST00000459725 609 ntBASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 AC023310.1-201ENST00000554836 735 ntBASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 DUX4L45-201ENST00000566406 1057 ntBASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 AHCYP2-201ENST00000430630 1300 ntBASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE3BQ7Z3V4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms