Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 AC138466.3-201ENST00000619983 221 ntBASIC16.03■□□□□ 0.16
TPGS2Q68CL5 AL139099.5-201ENST00000635274 300 ntBASIC16.03■□□□□ 0.16
TPGS2Q68CL5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TPGS2Q68CL5 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.02■□□□□ 0.16
TPGS2Q68CL5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 AL391280.1-201ENST00000506969 1062 ntBASIC16.02■□□□□ 0.16
TPGS2Q68CL5 AC106820.3-201ENST00000561653 397 ntBASIC16.02■□□□□ 0.16
TPGS2Q68CL5 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 AC244452.3-201ENST00000636814 210 ntBASIC16.02■□□□□ 0.16
TPGS2Q68CL5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TPGS2Q68CL5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TPGS2Q68CL5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TPGS2Q68CL5 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TPGS2Q68CL5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TPGS2Q68CL5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TPGS2Q68CL5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TPGS2Q68CL5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
TPGS2Q68CL5 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TPGS2Q68CL5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TPGS2Q68CL5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 AL365203.3-201ENST00000609742 2057 ntBASIC16.01■□□□□ 0.15
TPGS2Q68CL5 REXO1L5P-201ENST00000622260 2098 ntBASIC16.01■□□□□ 0.15
TPGS2Q68CL5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.01■□□□□ 0.15
TPGS2Q68CL5 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.01■□□□□ 0.15
TPGS2Q68CL5 AC091804.1-201ENST00000486888 567 ntBASIC16.01■□□□□ 0.15
TPGS2Q68CL5 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 AC090616.6-203ENST00000579186 1945 ntBASIC16.01■□□□□ 0.15
TPGS2Q68CL5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.01■□□□□ 0.15
TPGS2Q68CL5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms