Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 PRKXP1-201ENST00000561423 1122 ntBASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 MTHFR-217ENST00000641820 1569 ntBASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 SLC16A6P1-201ENST00000413214 1059 ntBASIC15□□□□□ -0.01
LYSMD4Q5XG99 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 AL596276.2-201ENST00000447525 331 ntBASIC15□□□□□ -0.01
LYSMD4Q5XG99 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 MESTP3-201ENST00000503460 968 ntBASIC15□□□□□ -0.01
LYSMD4Q5XG99 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 AL136295.7-201ENST00000619226 1200 ntBASIC15□□□□□ -0.01
LYSMD4Q5XG99 AC092364.2-201ENST00000596710 2692 ntBASIC15□□□□□ -0.01
LYSMD4Q5XG99 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 ILF3-AS1-201ENST00000591501 1983 ntBASIC15□□□□□ -0.01
LYSMD4Q5XG99 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD4Q5XG99 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD4Q5XG99 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms