Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM71Q2Q1W2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 RN7SL769P-201ENST00000469386 295 ntBASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 IMP3P2-201ENST00000489760 475 ntBASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 FTLP10-202ENST00000505798 471 ntBASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 AL645939.5-201ENST00000606834 243 ntBASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM71Q2Q1W2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 AC022217.1-201ENST00000521069 738 ntBASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 MIR4783-201ENST00000580343 82 ntBASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 AC091812.3-201ENST00000621362 345 ntBASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM71Q2Q1W2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 DPM3-202ENST00000368399 517 ntBASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 RPL5P21-201ENST00000404620 815 ntBASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.67■□□□□ 0.26
TRIM71Q2Q1W2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms