Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 AC007969.1-201ENST00000433675 447 ntBASIC18.32■□□□□ 0.52
PDS5AQ29RF7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 PPY2P-201ENST00000582808 702 ntBASIC18.32■□□□□ 0.52
PDS5AQ29RF7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 AC091271.1-201ENST00000611877 1162 ntBASIC18.32■□□□□ 0.52
PDS5AQ29RF7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 MIR6787-201ENST00000616675 61 ntBASIC18.32■□□□□ 0.52
PDS5AQ29RF7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 OR6D1P-203ENST00000641209 4860 ntBASIC18.32■□□□□ 0.52
PDS5AQ29RF7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDS5AQ29RF7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 MIR663B-201ENST00000408361 115 ntBASIC18.31■□□□□ 0.52
PDS5AQ29RF7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 AC138696.2-201ENST00000607376 223 ntBASIC18.31■□□□□ 0.52
PDS5AQ29RF7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 PRAL-201ENST00000624952 3286 ntBASIC18.31■□□□□ 0.52
PDS5AQ29RF7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 PKD1P1-201ENST00000458669 6805 ntBASIC18.31■□□□□ 0.52
PDS5AQ29RF7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDS5AQ29RF7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 ZNF767P-206ENST00000513792 565 ntBASIC18.3■□□□□ 0.52
PDS5AQ29RF7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms