Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCNA1P78396 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CCNA1P78396 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCNA1P78396 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.42■□□□□ 0.38
CCNA1P78396 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.41■□□□□ 0.38
CCNA1P78396 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCNA1P78396 AC099398.1-201ENST00000567919 2776 ntBASIC17.41■□□□□ 0.38
CCNA1P78396 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCNA1P78396 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.41■□□□□ 0.38
CCNA1P78396 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCNA1P78396 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.41■□□□□ 0.38
CCNA1P78396 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.41■□□□□ 0.38
CCNA1P78396 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.41■□□□□ 0.38
CCNA1P78396 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.41■□□□□ 0.38
CCNA1P78396 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.41■□□□□ 0.38
CCNA1P78396 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.41■□□□□ 0.38
CCNA1P78396 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCNA1P78396 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.41■□□□□ 0.38
CCNA1P78396 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCNA1P78396 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.41■□□□□ 0.38
CCNA1P78396 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CCNA1P78396 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 TUBBP5-203ENST00000508529 1334 ntBASIC17.41■□□□□ 0.38
CCNA1P78396 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.41■□□□□ 0.38
CCNA1P78396 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
CCNA1P78396 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCNA1P78396 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNA1P78396 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCNA1P78396 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CCNA1P78396 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCNA1P78396 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CCNA1P78396 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 AC112504.1-201ENST00000623415 1841 ntBASIC17.4■□□□□ 0.38
CCNA1P78396 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCNA1P78396 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCNA1P78396 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.4■□□□□ 0.38
CCNA1P78396 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.4■□□□□ 0.38
CCNA1P78396 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCNA1P78396 HINT2P1-201ENST00000419438 481 ntBASIC17.4■□□□□ 0.38
CCNA1P78396 MAGEA5-201ENST00000446757 942 ntBASIC17.4■□□□□ 0.38
CCNA1P78396 RN7SL11P-201ENST00000471305 293 ntBASIC17.4■□□□□ 0.38
CCNA1P78396 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 MESTP3-201ENST00000503460 968 ntBASIC17.4■□□□□ 0.38
CCNA1P78396 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.4■□□□□ 0.38
CCNA1P78396 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.4■□□□□ 0.38
CCNA1P78396 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.4■□□□□ 0.38
CCNA1P78396 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.4■□□□□ 0.38
CCNA1P78396 AC097724.1-201ENST00000609581 426 ntBASIC17.4■□□□□ 0.38
CCNA1P78396 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.4■□□□□ 0.38
CCNA1P78396 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCNA1P78396 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 CLUHP2-201ENST00000426660 1303 ntBASIC17.4■□□□□ 0.38
CCNA1P78396 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.4■□□□□ 0.38
CCNA1P78396 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.4■□□□□ 0.38
CCNA1P78396 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNA1P78396 PCDHA14-201ENST00000506751 2298 ntBASIC17.4■□□□□ 0.38
CCNA1P78396 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CCNA1P78396 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.39■□□□□ 0.38
CCNA1P78396 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.39■□□□□ 0.38
CCNA1P78396 AL662844.4-201ENST00000606367 2838 ntBASIC17.39■□□□□ 0.38
CCNA1P78396 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CCNA1P78396 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNA1P78396 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.39■□□□□ 0.37
CCNA1P78396 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCNA1P78396 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CCNA1P78396 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms