Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCR4P61073 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCR4P61073 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CXCR4P61073 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCR4P61073 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.13□□□□□ -0.15
CXCR4P61073 HNRNPUP1-201ENST00000554987 333 ntBASIC14.13□□□□□ -0.15
CXCR4P61073 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.13□□□□□ -0.15
CXCR4P61073 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCR4P61073 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CXCR4P61073 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 AC079781.5-202ENST00000641784 3743 ntBASIC14.12□□□□□ -0.15
CXCR4P61073 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CXCR4P61073 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
CXCR4P61073 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCR4P61073 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCR4P61073 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.12□□□□□ -0.15
CXCR4P61073 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.12□□□□□ -0.15
CXCR4P61073 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
CXCR4P61073 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCR4P61073 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.12□□□□□ -0.15
CXCR4P61073 AL138918.1-201ENST00000568306 659 ntBASIC14.12□□□□□ -0.15
CXCR4P61073 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 AC073389.1-201ENST00000595595 795 ntBASIC14.12□□□□□ -0.15
CXCR4P61073 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 SPTSSB-204ENST00000617024 1292 ntBASIC14.12□□□□□ -0.15
CXCR4P61073 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CXCR4P61073 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CXCR4P61073 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.12□□□□□ -0.15
CXCR4P61073 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CXCR4P61073 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCR4P61073 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCR4P61073 TCAF1P1-201ENST00000414990 2232 ntBASIC14.11□□□□□ -0.15
CXCR4P61073 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCR4P61073 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CXCR4P61073 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CXCR4P61073 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CXCR4P61073 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.11□□□□□ -0.15
CXCR4P61073 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCR4P61073 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms