Protein–RNA interactions for Protein: P57075

UBASH3A, Ubiquitin-associated and SH3 domain-containing protein A, humanhuman

Predictions only

Length 661 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3AP57075 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
UBASH3AP57075 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.11■□□□□ 0.33
UBASH3AP57075 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.11■□□□□ 0.33
UBASH3AP57075 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBASH3AP57075 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
UBASH3AP57075 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.11■□□□□ 0.33
UBASH3AP57075 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.11■□□□□ 0.33
UBASH3AP57075 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
UBASH3AP57075 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
UBASH3AP57075 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.11■□□□□ 0.33
UBASH3AP57075 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.11■□□□□ 0.33
UBASH3AP57075 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.11■□□□□ 0.33
UBASH3AP57075 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 SLC25A39P2-201ENST00000537614 270 ntBASIC17.11■□□□□ 0.33
UBASH3AP57075 RARRES2P9-201ENST00000565168 469 ntBASIC17.11■□□□□ 0.33
UBASH3AP57075 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.11■□□□□ 0.33
UBASH3AP57075 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 ZNF259P1-201ENST00000407656 1365 ntBASIC17.11■□□□□ 0.33
UBASH3AP57075 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
UBASH3AP57075 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
UBASH3AP57075 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBASH3AP57075 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UBASH3AP57075 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.1■□□□□ 0.33
UBASH3AP57075 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.1■□□□□ 0.33
UBASH3AP57075 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 AC041040.2-201ENST00000622926 2899 ntBASIC17.1■□□□□ 0.33
UBASH3AP57075 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
UBASH3AP57075 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.1■□□□□ 0.33
UBASH3AP57075 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.1■□□□□ 0.33
UBASH3AP57075 KRT18P3-201ENST00000451602 1288 ntBASIC17.1■□□□□ 0.33
UBASH3AP57075 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.1■□□□□ 0.33
UBASH3AP57075 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.1■□□□□ 0.33
UBASH3AP57075 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.1■□□□□ 0.33
UBASH3AP57075 AC084121.4-201ENST00000641598 221 ntBASIC17.1■□□□□ 0.33
UBASH3AP57075 AF228730.8-201ENST00000642140 221 ntBASIC17.1■□□□□ 0.33
UBASH3AP57075 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 IL9RP2-201ENST00000423948 1312 ntBASIC17.1■□□□□ 0.33
UBASH3AP57075 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UBASH3AP57075 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.1■□□□□ 0.33
UBASH3AP57075 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.1■□□□□ 0.33
UBASH3AP57075 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UBASH3AP57075 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
UBASH3AP57075 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
UBASH3AP57075 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBASH3AP57075 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.09■□□□□ 0.33
UBASH3AP57075 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBASH3AP57075 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBASH3AP57075 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.09■□□□□ 0.33
UBASH3AP57075 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBASH3AP57075 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms