Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 RN7SKP175-201ENST00000408472 289 ntBASIC19.39■□□□□ 0.69
KCNQ4P56696 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.39■□□□□ 0.69
KCNQ4P56696 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.39■□□□□ 0.69
KCNQ4P56696 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19.39■□□□□ 0.69
KCNQ4P56696 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.39■□□□□ 0.69
KCNQ4P56696 AC009779.1-201ENST00000551138 283 ntBASIC19.39■□□□□ 0.69
KCNQ4P56696 AC008805.1-201ENST00000590892 364 ntBASIC19.39■□□□□ 0.69
KCNQ4P56696 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
KCNQ4P56696 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KCNQ4P56696 GMFG-209ENST00000600322 622 ntTSL 5 BASIC19.39■□□□□ 0.69
KCNQ4P56696 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 AC002472.3-201ENST00000640124 621 ntBASIC19.39■□□□□ 0.69
KCNQ4P56696 NAP1L6-202ENST00000641404 1222 ntBASIC19.39■□□□□ 0.69
KCNQ4P56696 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.39■□□□□ 0.69
KCNQ4P56696 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 AP000593.2-201ENST00000542775 1433 ntBASIC19.39■□□□□ 0.69
KCNQ4P56696 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
KCNQ4P56696 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.39■□□□□ 0.69
KCNQ4P56696 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.39■□□□□ 0.69
KCNQ4P56696 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.39■□□□□ 0.69
KCNQ4P56696 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 AL359258.3-201ENST00000622910 2331 ntBASIC19.39■□□□□ 0.69
KCNQ4P56696 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ4P56696 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.38■□□□□ 0.69
KCNQ4P56696 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.38■□□□□ 0.69
KCNQ4P56696 SHC1P1-201ENST00000425230 1745 ntBASIC19.38■□□□□ 0.69
KCNQ4P56696 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
KCNQ4P56696 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC19.38■□□□□ 0.69
KCNQ4P56696 HLA-J-204ENST00000495278 958 ntBASIC19.38■□□□□ 0.69
KCNQ4P56696 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 AC136759.1-202ENST00000530858 2194 ntBASIC19.38■□□□□ 0.69
KCNQ4P56696 FOS-204ENST00000554617 796 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ4P56696 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
KCNQ4P56696 AC069224.1-201ENST00000566372 1715 ntBASIC19.38■□□□□ 0.69
KCNQ4P56696 DUX4L47-201ENST00000566374 394 ntBASIC19.38■□□□□ 0.69
KCNQ4P56696 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ4P56696 AL132994.2-201ENST00000603120 687 ntBASIC19.38■□□□□ 0.69
KCNQ4P56696 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ4P56696 AL136295.7-201ENST00000619226 1200 ntBASIC19.38■□□□□ 0.69
KCNQ4P56696 AC242376.2-201ENST00000619355 883 ntBASIC19.38■□□□□ 0.69
KCNQ4P56696 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
KCNQ4P56696 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ4P56696 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 AC127024.7-201ENST00000625101 200 ntBASIC19.38■□□□□ 0.69
KCNQ4P56696 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ4P56696 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ4P56696 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
KCNQ4P56696 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ4P56696 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNQ4P56696 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNQ4P56696 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ4P56696 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNQ4P56696 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
KCNQ4P56696 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 RPL8P2-201ENST00000430538 502 ntBASIC19.37■□□□□ 0.69
KCNQ4P56696 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ4P56696 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ4P56696 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ4P56696 DUX4L46-201ENST00000566845 751 ntBASIC19.37■□□□□ 0.69
KCNQ4P56696 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNQ4P56696 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.37■□□□□ 0.69
KCNQ4P56696 MIR6756-201ENST00000616240 63 ntBASIC19.37■□□□□ 0.69
KCNQ4P56696 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
KCNQ4P56696 AC092127.1-201ENST00000567093 3455 ntBASIC19.37■□□□□ 0.69
KCNQ4P56696 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNQ4P56696 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KCNQ4P56696 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms