Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.99■□□□□ 0.31
LBX1P52954 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.99■□□□□ 0.31
LBX1P52954 GNG10P1-201ENST00000452289 199 ntBASIC16.99■□□□□ 0.31
LBX1P52954 AC093826.1-201ENST00000508655 993 ntBASIC16.99■□□□□ 0.31
LBX1P52954 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 FBXO36P1-201ENST00000579006 471 ntBASIC16.99■□□□□ 0.31
LBX1P52954 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC16.99■□□□□ 0.31
LBX1P52954 AC020922.4-201ENST00000621389 339 ntBASIC16.99■□□□□ 0.31
LBX1P52954 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
LBX1P52954 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LBX1P52954 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 TMBIM7P-202ENST00000641474 1516 ntBASIC16.99■□□□□ 0.31
LBX1P52954 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.99■□□□□ 0.31
LBX1P52954 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LBX1P52954 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LBX1P52954 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LBX1P52954 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 FAM197Y6-201ENST00000420524 766 ntBASIC16.98■□□□□ 0.31
LBX1P52954 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.98■□□□□ 0.31
LBX1P52954 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.98■□□□□ 0.31
LBX1P52954 AL451000.1-201ENST00000451300 1186 ntBASIC16.98■□□□□ 0.31
LBX1P52954 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.98■□□□□ 0.31
LBX1P52954 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 URB1-AS1-201ENST00000534991 831 ntBASIC16.98■□□□□ 0.31
LBX1P52954 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC16.98■□□□□ 0.31
LBX1P52954 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.98■□□□□ 0.31
LBX1P52954 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC16.98■□□□□ 0.31
LBX1P52954 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
LBX1P52954 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 AC138696.2-201ENST00000607376 223 ntBASIC16.98■□□□□ 0.31
LBX1P52954 AC007250.1-201ENST00000608934 338 ntBASIC16.98■□□□□ 0.31
LBX1P52954 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.98■□□□□ 0.31
LBX1P52954 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LBX1P52954 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.98■□□□□ 0.31
LBX1P52954 AL137077.2-201ENST00000635124 1608 ntBASIC16.98■□□□□ 0.31
LBX1P52954 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
LBX1P52954 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LBX1P52954 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
LBX1P52954 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LBX1P52954 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LBX1P52954 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.97■□□□□ 0.31
LBX1P52954 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
LBX1P52954 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
LBX1P52954 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 AC011840.2-201ENST00000563063 1520 ntBASIC16.97■□□□□ 0.31
LBX1P52954 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LBX1P52954 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LBX1P52954 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LBX1P52954 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.97■□□□□ 0.31
LBX1P52954 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.97■□□□□ 0.31
LBX1P52954 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 RN7SL23P-201ENST00000484055 275 ntBASIC16.97■□□□□ 0.31
LBX1P52954 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.97■□□□□ 0.31
LBX1P52954 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.97■□□□□ 0.31
LBX1P52954 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.97■□□□□ 0.31
LBX1P52954 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms