Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NKX2-5P52952 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX2-5P52952 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.15□□□□□ -0.3
NKX2-5P52952 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
NKX2-5P52952 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX2-5P52952 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
NKX2-5P52952 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX2-5P52952 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NKX2-5P52952 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX2-5P52952 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
NKX2-5P52952 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NKX2-5P52952 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NKX2-5P52952 FAM220CP-201ENST00000395253 831 ntBASIC13.15□□□□□ -0.3
NKX2-5P52952 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
NKX2-5P52952 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX2-5P52952 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.15□□□□□ -0.3
NKX2-5P52952 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX2-5P52952 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 PCDHA5-203ENST00000614258 4248 ntBASIC13.15□□□□□ -0.3
NKX2-5P52952 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.15□□□□□ -0.3
NKX2-5P52952 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.15□□□□□ -0.31
NKX2-5P52952 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
NKX2-5P52952 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC13.15□□□□□ -0.31
NKX2-5P52952 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX2-5P52952 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX2-5P52952 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
NKX2-5P52952 AC055811.4-201ENST00000624039 1754 ntBASIC13.15□□□□□ -0.31
NKX2-5P52952 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX2-5P52952 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX2-5P52952 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NKX2-5P52952 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.14□□□□□ -0.31
NKX2-5P52952 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NKX2-5P52952 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
NKX2-5P52952 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 AL031719.1-201ENST00000623365 2587 ntBASIC13.14□□□□□ -0.31
NKX2-5P52952 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.14□□□□□ -0.31
NKX2-5P52952 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NKX2-5P52952 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 RNA5SP413-201ENST00000516373 109 ntBASIC13.14□□□□□ -0.31
NKX2-5P52952 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 AC142086.2-201ENST00000569753 217 ntBASIC13.14□□□□□ -0.31
NKX2-5P52952 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 AC104771.1-201ENST00000603335 964 ntBASIC13.14□□□□□ -0.31
NKX2-5P52952 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX2-5P52952 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX2-5P52952 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NKX2-5P52952 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms