Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN4P51793 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCN4P51793 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCN4P51793 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.15■□□□□ 0.18
CLCN4P51793 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLCN4P51793 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 LINC02447-202ENST00000501888 2146 ntBASIC16.15■□□□□ 0.18
CLCN4P51793 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 FER1L4-210ENST00000615531 5998 ntBASIC16.15■□□□□ 0.18
CLCN4P51793 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.14■□□□□ 0.18
CLCN4P51793 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.14■□□□□ 0.18
CLCN4P51793 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLCN4P51793 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
CLCN4P51793 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
CLCN4P51793 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.14■□□□□ 0.17
CLCN4P51793 AC084364.1-201ENST00000551967 1556 ntBASIC16.14■□□□□ 0.17
CLCN4P51793 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN4P51793 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCN4P51793 POM121L8P-201ENST00000417732 1281 ntBASIC16.14■□□□□ 0.17
CLCN4P51793 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 POM121L9P-203ENST00000441984 1285 ntBASIC16.14■□□□□ 0.17
CLCN4P51793 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CLCN4P51793 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.14■□□□□ 0.17
CLCN4P51793 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN4P51793 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCN4P51793 RN7SL713P-201ENST00000582127 302 ntBASIC16.14■□□□□ 0.17
CLCN4P51793 PPY2P-201ENST00000582808 702 ntBASIC16.14■□□□□ 0.17
CLCN4P51793 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN4P51793 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.14■□□□□ 0.17
CLCN4P51793 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.14■□□□□ 0.17
CLCN4P51793 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN4P51793 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
CLCN4P51793 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLCN4P51793 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CLCN4P51793 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN4P51793 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CLCN4P51793 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 AC046158.3-201ENST00000624947 2558 ntBASIC16.14■□□□□ 0.17
CLCN4P51793 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN4P51793 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCN4P51793 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLCN4P51793 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLCN4P51793 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCN4P51793 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.13■□□□□ 0.17
CLCN4P51793 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.13■□□□□ 0.17
CLCN4P51793 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.13■□□□□ 0.17
CLCN4P51793 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 AC105129.2-201ENST00000559536 390 ntBASIC16.13■□□□□ 0.17
CLCN4P51793 RN7SL190P-201ENST00000582519 257 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms