Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.41■□□□□ 0.38
USP11P51784 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.41■□□□□ 0.38
USP11P51784 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
USP11P51784 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.41■□□□□ 0.38
USP11P51784 AC008735.3-201ENST00000596646 500 ntBASIC17.41■□□□□ 0.38
USP11P51784 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.41■□□□□ 0.38
USP11P51784 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
USP11P51784 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.41■□□□□ 0.38
USP11P51784 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP11P51784 AC134312.5-201ENST00000568031 1313 ntBASIC17.41■□□□□ 0.38
USP11P51784 AL360270.3-201ENST00000609118 1348 ntBASIC17.41■□□□□ 0.38
USP11P51784 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
USP11P51784 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.41■□□□□ 0.38
USP11P51784 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.41■□□□□ 0.38
USP11P51784 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP11P51784 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
USP11P51784 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.41■□□□□ 0.38
USP11P51784 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP11P51784 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.41■□□□□ 0.38
USP11P51784 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.41■□□□□ 0.38
USP11P51784 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP11P51784 WASH3P-207ENST00000560956 1394 ntBASIC17.4■□□□□ 0.38
USP11P51784 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.4■□□□□ 0.38
USP11P51784 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 AC005229.1-201ENST00000392885 409 ntBASIC17.4■□□□□ 0.38
USP11P51784 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.4■□□□□ 0.38
USP11P51784 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.4■□□□□ 0.38
USP11P51784 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.4■□□□□ 0.38
USP11P51784 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.4■□□□□ 0.38
USP11P51784 USP32P1-208ENST00000506594 1164 ntBASIC17.4■□□□□ 0.38
USP11P51784 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.4■□□□□ 0.38
USP11P51784 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
USP11P51784 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
USP11P51784 AC106886.1-201ENST00000568660 600 ntBASIC17.4■□□□□ 0.38
USP11P51784 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.4■□□□□ 0.38
USP11P51784 BTNL10-201ENST00000595971 695 ntBASIC17.4■□□□□ 0.38
USP11P51784 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.4■□□□□ 0.38
USP11P51784 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USP11P51784 REXO1L4P-201ENST00000605109 1937 ntBASIC17.4■□□□□ 0.38
USP11P51784 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 AC006486.2-201ENST00000624246 2199 ntBASIC17.4■□□□□ 0.38
USP11P51784 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
USP11P51784 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.4■□□□□ 0.38
USP11P51784 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP11P51784 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.4■□□□□ 0.38
USP11P51784 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.4■□□□□ 0.38
USP11P51784 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.4■□□□□ 0.38
USP11P51784 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.4■□□□□ 0.38
USP11P51784 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
USP11P51784 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
USP11P51784 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
USP11P51784 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
USP11P51784 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
USP11P51784 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 KLF2P2-201ENST00000416807 1039 ntBASIC17.39■□□□□ 0.37
USP11P51784 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 KRT18P25-201ENST00000508931 1278 ntBASIC17.39■□□□□ 0.37
USP11P51784 AP001889.1-201ENST00000525414 633 ntBASIC17.39■□□□□ 0.37
USP11P51784 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.39■□□□□ 0.37
USP11P51784 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.39■□□□□ 0.37
USP11P51784 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.39■□□□□ 0.37
USP11P51784 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.39■□□□□ 0.37
USP11P51784 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms