Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 AC126365.1-201ENST00000578585 1514 ntBASIC10.23□□□□□ -0.77
PCP4P48539 APBB2-214ENST00000508593 3592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
PCP4P48539 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 SHANK2-AS1-201ENST00000429561 2252 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC10.22□□□□□ -0.77
PCP4P48539 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
PCP4P48539 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 PPM1K-209ENST00000514204 2962 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 ATXN7L3-201ENST00000389384 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC10.22□□□□□ -0.77
PCP4P48539 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC10.22□□□□□ -0.77
PCP4P48539 GPR17-206ENST00000544369 2598 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
PCP4P48539 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 LRRN2-202ENST00000367176 3211 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC10.22□□□□□ -0.77
PCP4P48539 KRT8P44-201ENST00000441609 1350 ntBASIC10.22□□□□□ -0.77
PCP4P48539 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 AC007336.3-201ENST00000623886 2160 ntBASIC10.22□□□□□ -0.77
PCP4P48539 AGGF1P10-201ENST00000635005 2191 ntBASIC10.22□□□□□ -0.77
PCP4P48539 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC10.22□□□□□ -0.77
PCP4P48539 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
PCP4P48539 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC10.22□□□□□ -0.77
PCP4P48539 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC10.22□□□□□ -0.77
PCP4P48539 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 THOC5-204ENST00000397873 2374 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
PCP4P48539 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
PCP4P48539 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PCP4P48539 ACVR2B-AS1-201ENST00000441531 2517 ntTSL 2 BASIC10.22□□□□□ -0.77
PCP4P48539 AC113208.3-201ENST00000637356 2523 ntBASIC10.22□□□□□ -0.77
PCP4P48539 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 PEX12-204ENST00000613219 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
PCP4P48539 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC10.21□□□□□ -0.77
PCP4P48539 AC016397.2-201ENST00000624848 1985 ntBASIC10.21□□□□□ -0.77
PCP4P48539 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.77
PCP4P48539 CYTH4-201ENST00000248901 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 DIS3L2-201ENST00000273009 3201 ntTSL 2 BASIC10.21□□□□□ -0.77
PCP4P48539 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 SAMD4B-213ENST00000610417 3664 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.77
PCP4P48539 SAMD4B-214ENST00000611159 3662 ntTSL 5 BASIC10.21□□□□□ -0.77
PCP4P48539 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
PCP4P48539 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
PCP4P48539 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
PCP4P48539 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC10.21□□□□□ -0.78
PCP4P48539 ASB15-201ENST00000275699 2706 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
PCP4P48539 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
PCP4P48539 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PCP4P48539 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PCP4P48539 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC10.21□□□□□ -0.78
PCP4P48539 STK26-203ENST00000394335 3017 ntTSL 2 BASIC10.21□□□□□ -0.78
PCP4P48539 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
PCP4P48539 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms