Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AL138828.2-201ENST00000615812 383 ntBASIC14.36□□□□□ -0.11
HTR3AP46098 AC093028.1-201ENST00000622998 982 ntBASIC14.36□□□□□ -0.11
HTR3AP46098 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.36□□□□□ -0.11
HTR3AP46098 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.36□□□□□ -0.11
HTR3AP46098 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.35□□□□□ -0.11
HTR3AP46098 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HTR3AP46098 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.35□□□□□ -0.11
HTR3AP46098 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HTR3AP46098 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.35□□□□□ -0.11
HTR3AP46098 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HTR3AP46098 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.35□□□□□ -0.11
HTR3AP46098 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HTR3AP46098 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 AC010327.5-201ENST00000586923 3061 ntBASIC14.35□□□□□ -0.11
HTR3AP46098 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.35□□□□□ -0.11
HTR3AP46098 RN7SL618P-201ENST00000477850 296 ntBASIC14.35□□□□□ -0.11
HTR3AP46098 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.35□□□□□ -0.11
HTR3AP46098 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 AC027369.6-201ENST00000525520 931 ntBASIC14.35□□□□□ -0.11
HTR3AP46098 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.35□□□□□ -0.11
HTR3AP46098 TEX28P1-201ENST00000613479 1221 ntBASIC14.35□□□□□ -0.11
HTR3AP46098 TEX28P2-201ENST00000617764 1221 ntBASIC14.35□□□□□ -0.11
HTR3AP46098 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.35□□□□□ -0.11
HTR3AP46098 SPDYE12P-201ENST00000618416 771 ntBASIC14.35□□□□□ -0.11
HTR3AP46098 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.35□□□□□ -0.11
HTR3AP46098 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HTR3AP46098 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HTR3AP46098 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HTR3AP46098 MIR600HG-201ENST00000449175 5984 ntBASIC14.35□□□□□ -0.11
HTR3AP46098 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HTR3AP46098 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.34□□□□□ -0.11
HTR3AP46098 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
HTR3AP46098 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.34□□□□□ -0.11
HTR3AP46098 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HTR3AP46098 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HTR3AP46098 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HTR3AP46098 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.34□□□□□ -0.11
HTR3AP46098 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HTR3AP46098 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HTR3AP46098 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HTR3AP46098 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HTR3AP46098 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HTR3AP46098 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.34□□□□□ -0.11
HTR3AP46098 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HTR3AP46098 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HTR3AP46098 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.34□□□□□ -0.11
HTR3AP46098 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.34□□□□□ -0.11
HTR3AP46098 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.34□□□□□ -0.11
HTR3AP46098 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.34□□□□□ -0.11
HTR3AP46098 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HTR3AP46098 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.34□□□□□ -0.11
HTR3AP46098 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms