Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SNCAP37840 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.81□□□□□ -0.36
SNCAP37840 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 AL031595.1-201ENST00000623969 4709 ntBASIC12.81□□□□□ -0.36
SNCAP37840 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SNCAP37840 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 AC025580.3-201ENST00000617932 1424 ntBASIC12.8□□□□□ -0.36
SNCAP37840 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 BX640514.1-201ENST00000583223 1918 ntBASIC12.8□□□□□ -0.36
SNCAP37840 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.8□□□□□ -0.36
SNCAP37840 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.8□□□□□ -0.36
SNCAP37840 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.8□□□□□ -0.36
SNCAP37840 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.8□□□□□ -0.36
SNCAP37840 AC024267.1-201ENST00000582320 895 ntBASIC12.8□□□□□ -0.36
SNCAP37840 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.8□□□□□ -0.36
SNCAP37840 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 Z83851.2-201ENST00000609564 659 ntBASIC12.8□□□□□ -0.36
SNCAP37840 AC004877.2-201ENST00000623941 599 ntBASIC12.8□□□□□ -0.36
SNCAP37840 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.8□□□□□ -0.36
SNCAP37840 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.8□□□□□ -0.36
SNCAP37840 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SNCAP37840 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.79□□□□□ -0.36
SNCAP37840 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SNCAP37840 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SNCAP37840 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms