Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 AC084364.1-201ENST00000551967 1556 ntBASIC16.36■□□□□ 0.21
PCK1P35558 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCK1P35558 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCK1P35558 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.36■□□□□ 0.21
PCK1P35558 AC092580.3-201ENST00000430932 139 ntBASIC16.36■□□□□ 0.21
PCK1P35558 FAM86GP-201ENST00000448322 971 ntBASIC16.36■□□□□ 0.21
PCK1P35558 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.36■□□□□ 0.21
PCK1P35558 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.36■□□□□ 0.21
PCK1P35558 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.36■□□□□ 0.21
PCK1P35558 SDHAP3-202ENST00000515467 728 ntBASIC16.36■□□□□ 0.21
PCK1P35558 AC027369.6-201ENST00000525520 931 ntBASIC16.36■□□□□ 0.21
PCK1P35558 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.36■□□□□ 0.21
PCK1P35558 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.36■□□□□ 0.21
PCK1P35558 AC074044.1-201ENST00000609673 707 ntBASIC16.36■□□□□ 0.21
PCK1P35558 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.36■□□□□ 0.21
PCK1P35558 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.36■□□□□ 0.21
PCK1P35558 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.36■□□□□ 0.21
PCK1P35558 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.36■□□□□ 0.21
PCK1P35558 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 KRT18P28-201ENST00000453838 1332 ntBASIC16.36■□□□□ 0.21
PCK1P35558 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.36■□□□□ 0.21
PCK1P35558 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
PCK1P35558 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PCK1P35558 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCK1P35558 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCK1P35558 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.35■□□□□ 0.21
PCK1P35558 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.35■□□□□ 0.21
PCK1P35558 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.35■□□□□ 0.21
PCK1P35558 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.35■□□□□ 0.21
PCK1P35558 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.35■□□□□ 0.21
PCK1P35558 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
PCK1P35558 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
PCK1P35558 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCK1P35558 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.35■□□□□ 0.21
PCK1P35558 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.35■□□□□ 0.21
PCK1P35558 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.35■□□□□ 0.21
PCK1P35558 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 AC097493.3-201ENST00000509725 367 ntBASIC16.35■□□□□ 0.21
PCK1P35558 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.35■□□□□ 0.21
PCK1P35558 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.35■□□□□ 0.21
PCK1P35558 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.35■□□□□ 0.21
PCK1P35558 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.35■□□□□ 0.21
PCK1P35558 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCK1P35558 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
PCK1P35558 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.35■□□□□ 0.21
PCK1P35558 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PCK1P35558 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.35■□□□□ 0.21
PCK1P35558 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCK1P35558 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.35■□□□□ 0.21
PCK1P35558 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCK1P35558 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCK1P35558 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.35■□□□□ 0.21
PCK1P35558 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCK1P35558 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCK1P35558 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCK1P35558 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.34■□□□□ 0.21
PCK1P35558 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCK1P35558 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.34■□□□□ 0.21
PCK1P35558 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCK1P35558 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.34■□□□□ 0.21
PCK1P35558 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms