Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SHC1P29353 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHC1P29353 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHC1P29353 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.23□□□□□ -0.13
SHC1P29353 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SHC1P29353 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.23□□□□□ -0.13
SHC1P29353 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.23□□□□□ -0.13
SHC1P29353 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
SHC1P29353 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.23□□□□□ -0.13
SHC1P29353 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.23□□□□□ -0.13
SHC1P29353 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.23□□□□□ -0.13
SHC1P29353 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.23□□□□□ -0.13
SHC1P29353 RPL13P2-201ENST00000440687 659 ntBASIC14.23□□□□□ -0.13
SHC1P29353 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.23□□□□□ -0.13
SHC1P29353 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.23□□□□□ -0.13
SHC1P29353 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.23□□□□□ -0.13
SHC1P29353 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.23□□□□□ -0.13
SHC1P29353 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SHC1P29353 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.23□□□□□ -0.13
SHC1P29353 AC009090.5-201ENST00000624886 2285 ntBASIC14.23□□□□□ -0.13
SHC1P29353 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SHC1P29353 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHC1P29353 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.23□□□□□ -0.13
SHC1P29353 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.23□□□□□ -0.13
SHC1P29353 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SHC1P29353 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.22□□□□□ -0.13
SHC1P29353 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.22□□□□□ -0.13
SHC1P29353 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.22□□□□□ -0.13
SHC1P29353 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
SHC1P29353 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 AC236430.1-201ENST00000402231 743 ntBASIC14.22□□□□□ -0.13
SHC1P29353 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.22□□□□□ -0.13
SHC1P29353 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.22□□□□□ -0.13
SHC1P29353 GNAQP1-201ENST00000444815 1067 ntBASIC14.22□□□□□ -0.13
SHC1P29353 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.22□□□□□ -0.13
SHC1P29353 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.22□□□□□ -0.13
SHC1P29353 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.22□□□□□ -0.13
SHC1P29353 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.22□□□□□ -0.13
SHC1P29353 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SHC1P29353 MIR4745-201ENST00000577608 62 ntBASIC14.22□□□□□ -0.13
SHC1P29353 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 RN7SL204P-201ENST00000582831 262 ntBASIC14.22□□□□□ -0.13
SHC1P29353 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.22□□□□□ -0.13
SHC1P29353 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.22□□□□□ -0.13
SHC1P29353 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.22□□□□□ -0.13
SHC1P29353 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.22□□□□□ -0.13
SHC1P29353 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.22□□□□□ -0.13
SHC1P29353 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.22□□□□□ -0.13
SHC1P29353 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.22□□□□□ -0.13
SHC1P29353 AC007292.2-201ENST00000593524 1812 ntBASIC14.22□□□□□ -0.13
SHC1P29353 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.22□□□□□ -0.13
SHC1P29353 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.22□□□□□ -0.13
SHC1P29353 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHC1P29353 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms