Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATF3P18847 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATF3P18847 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.85■□□□□ 0.93
ATF3P18847 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.85■□□□□ 0.93
ATF3P18847 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATF3P18847 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATF3P18847 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ATF3P18847 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATF3P18847 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATF3P18847 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATF3P18847 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ATF3P18847 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.85■□□□□ 0.93
ATF3P18847 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATF3P18847 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC20.85■□□□□ 0.93
ATF3P18847 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ATF3P18847 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ATF3P18847 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ATF3P18847 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
ATF3P18847 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ATF3P18847 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.84■□□□□ 0.93
ATF3P18847 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ATF3P18847 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 Z69890.1-201ENST00000382990 339 ntBASIC20.84■□□□□ 0.93
ATF3P18847 RPL18AP3-201ENST00000462885 528 ntBASIC20.84■□□□□ 0.93
ATF3P18847 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC20.84■□□□□ 0.93
ATF3P18847 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.84■□□□□ 0.93
ATF3P18847 AL022344.2-201ENST00000568976 968 ntBASIC20.84■□□□□ 0.93
ATF3P18847 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
ATF3P18847 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 MEG3_2.1-201ENST00000611456 105 ntBASIC20.84■□□□□ 0.93
ATF3P18847 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 AC136759.1-202ENST00000530858 2194 ntBASIC20.84■□□□□ 0.93
ATF3P18847 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
ATF3P18847 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.84■□□□□ 0.93
ATF3P18847 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.84■□□□□ 0.93
ATF3P18847 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC20.84■□□□□ 0.93
ATF3P18847 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATF3P18847 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ATF3P18847 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.83■□□□□ 0.93
ATF3P18847 FRMPD2B-201ENST00000431305 1347 ntBASIC20.83■□□□□ 0.93
ATF3P18847 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATF3P18847 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ATF3P18847 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
ATF3P18847 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATF3P18847 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 AL139008.1-201ENST00000437894 228 ntBASIC20.83■□□□□ 0.93
ATF3P18847 REEP5-205ENST00000504247 480 ntTSL 5 BASIC20.83■□□□□ 0.93
ATF3P18847 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC20.83■□□□□ 0.93
ATF3P18847 AP003398.1-201ENST00000531124 318 ntBASIC20.83■□□□□ 0.93
ATF3P18847 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC20.83■□□□□ 0.93
ATF3P18847 AC008825.2-201ENST00000603374 718 ntBASIC20.83■□□□□ 0.93
ATF3P18847 LINC01783-202ENST00000614408 828 ntBASIC20.83■□□□□ 0.93
ATF3P18847 BX284668.2-205ENST00000619677 828 ntBASIC20.83■□□□□ 0.93
ATF3P18847 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF3P18847 Z98259.2-201ENST00000641583 609 ntBASIC20.83■□□□□ 0.93
ATF3P18847 AC124067.4-201ENST00000519691 2379 ntBASIC20.83■□□□□ 0.93
ATF3P18847 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ATF3P18847 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC20.83■□□□□ 0.92
ATF3P18847 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATF3P18847 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATF3P18847 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ATF3P18847 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
ATF3P18847 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATF3P18847 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATF3P18847 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.83■□□□□ 0.92
ATF3P18847 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATF3P18847 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATF3P18847 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATF3P18847 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ATF3P18847 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.82■□□□□ 0.92
ATF3P18847 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC20.82■□□□□ 0.92
ATF3P18847 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC20.82■□□□□ 0.92
ATF3P18847 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATF3P18847 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms