Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.63□□□□□ -0.23
ATF1P18846 MTHFR-210ENST00000641407 2387 ntBASIC13.63□□□□□ -0.23
ATF1P18846 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ATF1P18846 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ATF1P18846 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ATF1P18846 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.63□□□□□ -0.23
ATF1P18846 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.63□□□□□ -0.23
ATF1P18846 SLC25A39P2-201ENST00000537614 270 ntBASIC13.63□□□□□ -0.23
ATF1P18846 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.63□□□□□ -0.23
ATF1P18846 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ATF1P18846 C20orf181-201ENST00000623918 480 ntBASIC13.63□□□□□ -0.23
ATF1P18846 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ATF1P18846 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 AC136759.1-202ENST00000530858 2194 ntBASIC13.63□□□□□ -0.23
ATF1P18846 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.63□□□□□ -0.23
ATF1P18846 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.63□□□□□ -0.23
ATF1P18846 AL928921.2-201ENST00000641325 2442 ntBASIC13.63□□□□□ -0.23
ATF1P18846 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.63□□□□□ -0.23
ATF1P18846 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.62□□□□□ -0.23
ATF1P18846 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
ATF1P18846 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
ATF1P18846 CICP11-201ENST00000434745 2827 ntBASIC13.62□□□□□ -0.23
ATF1P18846 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ATF1P18846 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.62□□□□□ -0.23
ATF1P18846 AL592309.1-201ENST00000443127 649 ntBASIC13.62□□□□□ -0.23
ATF1P18846 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.62□□□□□ -0.23
ATF1P18846 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.62□□□□□ -0.23
ATF1P18846 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.62□□□□□ -0.23
ATF1P18846 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.62□□□□□ -0.23
ATF1P18846 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
ATF1P18846 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.62□□□□□ -0.23
ATF1P18846 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.62□□□□□ -0.23
ATF1P18846 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.62□□□□□ -0.23
ATF1P18846 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.62□□□□□ -0.23
ATF1P18846 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.62□□□□□ -0.23
ATF1P18846 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.62□□□□□ -0.23
ATF1P18846 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ATF1P18846 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ATF1P18846 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ATF1P18846 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.62□□□□□ -0.23
ATF1P18846 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATF1P18846 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
ATF1P18846 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.61□□□□□ -0.23
ATF1P18846 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.61□□□□□ -0.23
ATF1P18846 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms