Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC2P18074 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC2P18074 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ERCC2P18074 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC2P18074 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ERCC2P18074 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC2P18074 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC2P18074 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.14
ERCC2P18074 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
ERCC2P18074 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.89■□□□□ 0.13
ERCC2P18074 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.89■□□□□ 0.13
ERCC2P18074 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.89■□□□□ 0.13
ERCC2P18074 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.89■□□□□ 0.13
ERCC2P18074 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
ERCC2P18074 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ERCC2P18074 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 AC087499.6-201ENST00000411576 835 ntBASIC15.89■□□□□ 0.13
ERCC2P18074 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.89■□□□□ 0.13
ERCC2P18074 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.89■□□□□ 0.13
ERCC2P18074 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.89■□□□□ 0.13
ERCC2P18074 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.89■□□□□ 0.13
ERCC2P18074 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.89■□□□□ 0.13
ERCC2P18074 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
ERCC2P18074 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.89■□□□□ 0.13
ERCC2P18074 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.89■□□□□ 0.13
ERCC2P18074 AC107373.2-201ENST00000607735 490 ntBASIC15.89■□□□□ 0.13
ERCC2P18074 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ERCC2P18074 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ERCC2P18074 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.89■□□□□ 0.13
ERCC2P18074 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.89■□□□□ 0.13
ERCC2P18074 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC2P18074 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.89■□□□□ 0.13
ERCC2P18074 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC2P18074 AC067930.6-201ENST00000623257 4947 ntBASIC15.89■□□□□ 0.13
ERCC2P18074 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC2P18074 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 AL596257.1-201ENST00000641463 2694 ntBASIC15.88■□□□□ 0.13
ERCC2P18074 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC2P18074 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ERCC2P18074 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 PIN1P1-201ENST00000412108 996 ntBASIC15.88■□□□□ 0.13
ERCC2P18074 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC2P18074 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.88■□□□□ 0.13
ERCC2P18074 TERF1P3-201ENST00000505638 1227 ntBASIC15.88■□□□□ 0.13
ERCC2P18074 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.88■□□□□ 0.13
ERCC2P18074 SAMD11P1-201ENST00000571429 661 ntBASIC15.88■□□□□ 0.13
ERCC2P18074 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.88■□□□□ 0.13
ERCC2P18074 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC2P18074 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms