Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 MIR6752-201ENST00000618442 71 ntBASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRGAP2CP0DJJ0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 AC007274.1-201ENST00000439805 662 ntBASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 KLF2P4-201ENST00000451959 1225 ntBASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 AC133552.6-201ENST00000613406 534 ntBASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 COX11-210ENST00000639671 696 ntBASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 AC007950.2-201ENST00000615045 2347 ntBASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRGAP2CP0DJJ0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 AC004066.1-201ENST00000502488 802 ntBASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 KRT18P25-201ENST00000508931 1278 ntBASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 AP005482.1-201ENST00000563722 1273 ntBASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRGAP2CP0DJJ0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRGAP2CP0DJJ0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRGAP2CP0DJJ0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.96■□□□□ 0.3
SRGAP2CP0DJJ0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SRGAP2CP0DJJ0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.96■□□□□ 0.3
SRGAP2CP0DJJ0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SRGAP2CP0DJJ0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SRGAP2CP0DJJ0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SRGAP2CP0DJJ0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRGAP2CP0DJJ0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRGAP2CP0DJJ0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.95■□□□□ 0.3
SRGAP2CP0DJJ0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRGAP2CP0DJJ0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRGAP2CP0DJJ0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRGAP2CP0DJJ0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms