Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HMGCRP04035 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HMGCRP04035 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGCRP04035 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCRP04035 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HMGCRP04035 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGCRP04035 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGCRP04035 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGCRP04035 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGCRP04035 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCRP04035 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.29■□□□□ 0.36
HMGCRP04035 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HMGCRP04035 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCRP04035 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HMGCRP04035 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGCRP04035 AC234782.1-201ENST00000451950 919 ntBASIC17.29■□□□□ 0.36
HMGCRP04035 AC004066.1-201ENST00000502488 802 ntBASIC17.29■□□□□ 0.36
HMGCRP04035 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 IQSEC3P1-201ENST00000538799 536 ntBASIC17.29■□□□□ 0.36
HMGCRP04035 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGCRP04035 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGCRP04035 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGCRP04035 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.29■□□□□ 0.36
HMGCRP04035 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGCRP04035 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 MIR4750-201ENST00000584564 56 ntBASIC17.29■□□□□ 0.36
HMGCRP04035 AP000346.4-201ENST00000614827 381 ntBASIC17.29■□□□□ 0.36
HMGCRP04035 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGCRP04035 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HMGCRP04035 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGCRP04035 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCRP04035 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCRP04035 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
HMGCRP04035 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 DOC2GP-204ENST00000639052 2548 ntBASIC17.28■□□□□ 0.36
HMGCRP04035 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
HMGCRP04035 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HMGCRP04035 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 AL136309.1-201ENST00000403917 691 ntBASIC17.28■□□□□ 0.36
HMGCRP04035 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.28■□□□□ 0.36
HMGCRP04035 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.28■□□□□ 0.36
HMGCRP04035 EIF3FP3-201ENST00000434851 1086 ntBASIC17.28■□□□□ 0.36
HMGCRP04035 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HMGCRP04035 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.28■□□□□ 0.36
HMGCRP04035 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCRP04035 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGCRP04035 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.28■□□□□ 0.36
HMGCRP04035 AC106820.3-201ENST00000561653 397 ntBASIC17.28■□□□□ 0.36
HMGCRP04035 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.28■□□□□ 0.36
HMGCRP04035 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 AL805961.1-203ENST00000641078 1258 ntBASIC17.28■□□□□ 0.36
HMGCRP04035 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HMGCRP04035 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCRP04035 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HMGCRP04035 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCRP04035 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCRP04035 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HMGCRP04035 AC007787.1-201ENST00000588095 1583 ntBASIC17.28■□□□□ 0.36
HMGCRP04035 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCRP04035 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGCRP04035 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCRP04035 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCRP04035 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCRP04035 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGCRP04035 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCRP04035 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCRP04035 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCRP04035 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCRP04035 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms