Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.85■□□□□ 0.29
VTNP04004 EIF3FP3-201ENST00000434851 1086 ntBASIC16.85■□□□□ 0.29
VTNP04004 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.85■□□□□ 0.29
VTNP04004 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.85■□□□□ 0.29
VTNP04004 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.85■□□□□ 0.29
VTNP04004 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.85■□□□□ 0.29
VTNP04004 MIR4741-201ENST00000579822 90 ntBASIC16.85■□□□□ 0.29
VTNP04004 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.85■□□□□ 0.29
VTNP04004 AC006453.4-201ENST00000636949 1252 ntBASIC16.85■□□□□ 0.29
VTNP04004 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.85■□□□□ 0.29
VTNP04004 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VTNP04004 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
VTNP04004 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.85■□□□□ 0.29
VTNP04004 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.84■□□□□ 0.29
VTNP04004 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.84■□□□□ 0.29
VTNP04004 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VTNP04004 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.84■□□□□ 0.29
VTNP04004 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.84■□□□□ 0.29
VTNP04004 TPM3P8-201ENST00000330554 643 ntBASIC16.84■□□□□ 0.29
VTNP04004 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.84■□□□□ 0.29
VTNP04004 RPL5P21-201ENST00000404620 815 ntBASIC16.84■□□□□ 0.29
VTNP04004 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.84■□□□□ 0.29
VTNP04004 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VTNP04004 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VTNP04004 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.84■□□□□ 0.29
VTNP04004 RN7SL48P-201ENST00000579283 293 ntBASIC16.84■□□□□ 0.29
VTNP04004 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.84■□□□□ 0.29
VTNP04004 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.84■□□□□ 0.29
VTNP04004 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.84■□□□□ 0.29
VTNP04004 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VTNP04004 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 AL354989.2-201ENST00000435838 1540 ntBASIC16.84■□□□□ 0.29
VTNP04004 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.84■□□□□ 0.29
VTNP04004 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
VTNP04004 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.84■□□□□ 0.29
VTNP04004 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VTNP04004 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VTNP04004 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
VTNP04004 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VTNP04004 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VTNP04004 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VTNP04004 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VTNP04004 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VTNP04004 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
VTNP04004 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 MIR326-201ENST00000362220 95 ntBASIC16.83■□□□□ 0.28
VTNP04004 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VTNP04004 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.83■□□□□ 0.28
VTNP04004 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VTNP04004 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.83■□□□□ 0.28
VTNP04004 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.83■□□□□ 0.28
VTNP04004 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.83■□□□□ 0.28
VTNP04004 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
VTNP04004 FAM8A2P-201ENST00000528813 1142 ntBASIC16.83■□□□□ 0.28
VTNP04004 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.83■□□□□ 0.28
VTNP04004 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.83■□□□□ 0.28
VTNP04004 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VTNP04004 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 REXO1L5P-201ENST00000622260 2098 ntBASIC16.83■□□□□ 0.28
VTNP04004 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms