Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.05■□□□□ -0
KRT6AP02538 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.05■□□□□ -0
KRT6AP02538 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.05■□□□□ -0
KRT6AP02538 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
KRT6AP02538 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.05■□□□□ -0
KRT6AP02538 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.05■□□□□ -0
KRT6AP02538 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.05■□□□□ -0
KRT6AP02538 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.05■□□□□ -0
KRT6AP02538 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
KRT6AP02538 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.05■□□□□ -0
KRT6AP02538 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KRT6AP02538 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.05■□□□□ -0
KRT6AP02538 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KRT6AP02538 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KRT6AP02538 AC067750.1-201ENST00000608826 6545 ntBASIC15.05■□□□□ -0
KRT6AP02538 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 ZBED1P1-201ENST00000502364 1930 ntBASIC15.04■□□□□ -0
KRT6AP02538 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.04■□□□□ -0
KRT6AP02538 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.04■□□□□ -0
KRT6AP02538 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.04■□□□□ -0
KRT6AP02538 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
KRT6AP02538 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.04■□□□□ -0
KRT6AP02538 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 HLA-V-204ENST00000476601 1289 ntBASIC15.04■□□□□ -0
KRT6AP02538 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.04■□□□□ -0
KRT6AP02538 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.04■□□□□ -0
KRT6AP02538 AC015910.1-201ENST00000579400 975 ntBASIC15.04■□□□□ -0
KRT6AP02538 AC025048.3-201ENST00000590609 569 ntBASIC15.04■□□□□ -0
KRT6AP02538 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 AC005702.4-201ENST00000618393 416 ntBASIC15.04■□□□□ -0
KRT6AP02538 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
KRT6AP02538 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.04■□□□□ -0
KRT6AP02538 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.04■□□□□ -0
KRT6AP02538 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT6AP02538 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
KRT6AP02538 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.04■□□□□ -0
KRT6AP02538 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
KRT6AP02538 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.03■□□□□ -0
KRT6AP02538 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
KRT6AP02538 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.03■□□□□ -0
KRT6AP02538 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.03■□□□□ -0
KRT6AP02538 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
KRT6AP02538 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
KRT6AP02538 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.03■□□□□ -0
KRT6AP02538 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
KRT6AP02538 AL133267.1-201ENST00000398220 340 ntBASIC15.03■□□□□ -0
KRT6AP02538 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.03■□□□□ -0
KRT6AP02538 RPL37AP1-201ENST00000412502 279 ntBASIC15.03■□□□□ -0
KRT6AP02538 AC074338.1-201ENST00000416825 156 ntBASIC15.03■□□□□ -0
KRT6AP02538 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT6AP02538 CNN2P2-201ENST00000443536 909 ntBASIC15.03■□□□□ -0
KRT6AP02538 CNN2P3-201ENST00000450201 906 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms