Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.31■□□□□ 0.04
PDGFBP01127 AC239868.1-201ENST00000369385 493 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.31■□□□□ 0.04
PDGFBP01127 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 C2orf69P1-201ENST00000563532 1093 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.31■□□□□ 0.04
PDGFBP01127 DUX4L46-201ENST00000566845 751 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.31■□□□□ 0.04
PDGFBP01127 RN7SL596P-201ENST00000582123 288 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 MEG3_2.1-201ENST00000611456 105 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PDGFBP01127 AC002472.3-201ENST00000640124 621 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 FAM90A2P-201ENST00000511144 1395 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 FAM90A25P-201ENST00000528404 1395 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 SHC1P1-201ENST00000425230 1745 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 ME2P1-201ENST00000426028 1970 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.3■□□□□ 0.04
PDGFBP01127 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PDGFBP01127 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.3■□□□□ 0.04
PDGFBP01127 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PDGFBP01127 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.3■□□□□ 0.04
PDGFBP01127 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PDGFBP01127 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.3■□□□□ 0.04
PDGFBP01127 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.3■□□□□ 0.04
PDGFBP01127 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 RN7SL258P-201ENST00000478664 300 ntBASIC15.3■□□□□ 0.04
PDGFBP01127 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.3■□□□□ 0.04
PDGFBP01127 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PDGFBP01127 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.3■□□□□ 0.04
PDGFBP01127 SAMD11P1-201ENST00000571429 661 ntBASIC15.3■□□□□ 0.04
PDGFBP01127 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.3■□□□□ 0.04
PDGFBP01127 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.3■□□□□ 0.04
PDGFBP01127 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PDGFBP01127 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 INE2-201ENST00000630399 1874 ntBASIC15.3■□□□□ 0.04
PDGFBP01127 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDGFBP01127 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PDGFBP01127 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.29■□□□□ 0.04
PDGFBP01127 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
PDGFBP01127 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.29■□□□□ 0.04
PDGFBP01127 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.29■□□□□ 0.04
PDGFBP01127 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.29■□□□□ 0.04
PDGFBP01127 AC011477.6-201ENST00000604980 1927 ntBASIC15.29■□□□□ 0.04
PDGFBP01127 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PDGFBP01127 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.29■□□□□ 0.04
PDGFBP01127 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 AP000593.2-201ENST00000542775 1433 ntBASIC15.29■□□□□ 0.04
PDGFBP01127 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 Z69890.1-201ENST00000382990 339 ntBASIC15.29■□□□□ 0.04
PDGFBP01127 RN7SKP175-201ENST00000408472 289 ntBASIC15.29■□□□□ 0.04
PDGFBP01127 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 AC026320.2-201ENST00000434379 478 ntBASIC15.29■□□□□ 0.04
PDGFBP01127 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.29■□□□□ 0.04
PDGFBP01127 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.29■□□□□ 0.04
PDGFBP01127 RPL18AP3-201ENST00000462885 528 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms