Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.43■□□□□ 0.22
TIMP1P01033 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TIMP1P01033 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 AC138894.2-201ENST00000602838 371 ntBASIC16.43■□□□□ 0.22
TIMP1P01033 AC008825.2-201ENST00000603374 718 ntBASIC16.43■□□□□ 0.22
TIMP1P01033 AC138696.2-201ENST00000607376 223 ntBASIC16.43■□□□□ 0.22
TIMP1P01033 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.43■□□□□ 0.22
TIMP1P01033 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.43■□□□□ 0.22
TIMP1P01033 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.43■□□□□ 0.22
TIMP1P01033 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
TIMP1P01033 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
TIMP1P01033 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TIMP1P01033 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 AC025271.4-201ENST00000621477 1726 ntBASIC16.42■□□□□ 0.22
TIMP1P01033 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TIMP1P01033 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TIMP1P01033 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 AP000356.3-201ENST00000382243 753 ntBASIC16.42■□□□□ 0.22
TIMP1P01033 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.42■□□□□ 0.22
TIMP1P01033 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 SCARNA21-201ENST00000517026 139 ntBASIC16.42■□□□□ 0.22
TIMP1P01033 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.42■□□□□ 0.22
TIMP1P01033 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.42■□□□□ 0.22
TIMP1P01033 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.42■□□□□ 0.22
TIMP1P01033 MIR4649-201ENST00000582839 64 ntBASIC16.42■□□□□ 0.22
TIMP1P01033 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.42■□□□□ 0.22
TIMP1P01033 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.42■□□□□ 0.22
TIMP1P01033 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.42■□□□□ 0.22
TIMP1P01033 AC244394.1-201ENST00000435000 1665 ntBASIC16.42■□□□□ 0.22
TIMP1P01033 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TIMP1P01033 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 AC127383.1-201ENST00000444697 1800 ntBASIC16.42■□□□□ 0.22
TIMP1P01033 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TIMP1P01033 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.42■□□□□ 0.22
TIMP1P01033 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 AC011676.5-201ENST00000624864 2660 ntBASIC16.42■□□□□ 0.22
TIMP1P01033 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TIMP1P01033 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TIMP1P01033 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
TIMP1P01033 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.41■□□□□ 0.22
TIMP1P01033 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.41■□□□□ 0.22
TIMP1P01033 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.41■□□□□ 0.22
TIMP1P01033 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.41■□□□□ 0.22
TIMP1P01033 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.41■□□□□ 0.22
TIMP1P01033 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.41■□□□□ 0.22
TIMP1P01033 AGGF1P2-201ENST00000426656 2106 ntBASIC16.41■□□□□ 0.22
TIMP1P01033 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 AC079112.1-201ENST00000454972 939 ntBASIC16.41■□□□□ 0.22
TIMP1P01033 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.41■□□□□ 0.22
TIMP1P01033 AC008723.1-201ENST00000506922 207 ntBASIC16.41■□□□□ 0.22
TIMP1P01033 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.41■□□□□ 0.22
TIMP1P01033 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.41■□□□□ 0.22
TIMP1P01033 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
TIMP1P01033 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TIMP1P01033 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.41■□□□□ 0.22
TIMP1P01033 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.41■□□□□ 0.22
TIMP1P01033 MIR6756-201ENST00000616240 63 ntBASIC16.41■□□□□ 0.22
TIMP1P01033 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TIMP1P01033 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TIMP1P01033 KRT8P21-201ENST00000430398 1491 ntBASIC16.41■□□□□ 0.22
TIMP1P01033 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.41■□□□□ 0.22
TIMP1P01033 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms