Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.86□□□□□ -0.19
ZIC3O60481 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.86□□□□□ -0.19
ZIC3O60481 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
ZIC3O60481 AL022328.1-201ENST00000610050 478 ntBASIC13.86□□□□□ -0.19
ZIC3O60481 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.86□□□□□ -0.19
ZIC3O60481 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
ZIC3O60481 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC3O60481 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ZIC3O60481 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC3O60481 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
ZIC3O60481 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 NFIC-211ENST00000641145 8399 ntBASIC13.86□□□□□ -0.19
ZIC3O60481 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ZIC3O60481 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC3O60481 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC3O60481 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
ZIC3O60481 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
ZIC3O60481 AC023024.2-201ENST00000623561 1993 ntBASIC13.85□□□□□ -0.19
ZIC3O60481 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ZIC3O60481 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ZIC3O60481 AC073347.1-201ENST00000421633 2643 ntBASIC13.85□□□□□ -0.19
ZIC3O60481 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC3O60481 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZIC3O60481 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC3O60481 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.85□□□□□ -0.19
ZIC3O60481 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.85□□□□□ -0.19
ZIC3O60481 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 GK-202ENST00000378941 458 ntTSL 3 BASIC13.85□□□□□ -0.19
ZIC3O60481 AL139094.1-201ENST00000405549 1188 ntBASIC13.85□□□□□ -0.19
ZIC3O60481 AL355864.2-201ENST00000447420 863 ntBASIC13.85□□□□□ -0.19
ZIC3O60481 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.85□□□□□ -0.19
ZIC3O60481 CROCCP4-201ENST00000457096 498 ntBASIC13.85□□□□□ -0.19
ZIC3O60481 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.85□□□□□ -0.19
ZIC3O60481 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 KRT18P25-201ENST00000508931 1278 ntBASIC13.85□□□□□ -0.19
ZIC3O60481 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.85□□□□□ -0.19
ZIC3O60481 RAB43P1-201ENST00000561790 589 ntBASIC13.85□□□□□ -0.19
ZIC3O60481 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.85□□□□□ -0.19
ZIC3O60481 AL512343.1-201ENST00000605837 169 ntBASIC13.85□□□□□ -0.19
ZIC3O60481 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC3O60481 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZIC3O60481 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ZIC3O60481 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 AL162727.3-201ENST00000635661 2787 ntBASIC13.85□□□□□ -0.19
ZIC3O60481 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC3O60481 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.85□□□□□ -0.19
ZIC3O60481 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZIC3O60481 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC3O60481 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ZIC3O60481 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 AC013268.4-201ENST00000637413 2228 ntBASIC13.84□□□□□ -0.19
ZIC3O60481 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms