Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
SNAI2O43623 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.67□□□□□ -0.54
SNAI2O43623 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.67□□□□□ -0.54
SNAI2O43623 AC092474.2-201ENST00000424288 719 ntBASIC11.67□□□□□ -0.54
SNAI2O43623 AL645939.2-201ENST00000427340 991 ntBASIC11.67□□□□□ -0.54
SNAI2O43623 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.67□□□□□ -0.54
SNAI2O43623 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.67□□□□□ -0.54
SNAI2O43623 RNPS1P1-201ENST00000507437 918 ntBASIC11.67□□□□□ -0.54
SNAI2O43623 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.67□□□□□ -0.54
SNAI2O43623 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 AP002414.3-201ENST00000589352 1468 ntBASIC11.67□□□□□ -0.54
SNAI2O43623 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 PEG13-201ENST00000631594 5667 ntBASIC11.67□□□□□ -0.54
SNAI2O43623 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SNAI2O43623 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.67□□□□□ -0.54
SNAI2O43623 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 AC127383.1-201ENST00000444697 1800 ntBASIC11.67□□□□□ -0.54
SNAI2O43623 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SNAI2O43623 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.67□□□□□ -0.54
SNAI2O43623 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SNAI2O43623 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.67□□□□□ -0.54
SNAI2O43623 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.67□□□□□ -0.54
SNAI2O43623 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.66□□□□□ -0.54
SNAI2O43623 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 DGCR9-201ENST00000609630 2415 ntBASIC11.66□□□□□ -0.54
SNAI2O43623 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
SNAI2O43623 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SNAI2O43623 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.66□□□□□ -0.54
SNAI2O43623 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.66□□□□□ -0.54
SNAI2O43623 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 PRELID1P1-202ENST00000567272 903 ntBASIC11.66□□□□□ -0.54
SNAI2O43623 MIR4751-201ENST00000578027 74 ntBASIC11.66□□□□□ -0.54
SNAI2O43623 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.66□□□□□ -0.54
SNAI2O43623 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SNAI2O43623 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SNAI2O43623 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
SNAI2O43623 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.66□□□□□ -0.54
SNAI2O43623 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SNAI2O43623 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.66□□□□□ -0.54
SNAI2O43623 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SNAI2O43623 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SNAI2O43623 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms