Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ADH5P3-201ENST00000433842 1137 ntBASIC15.73■□□□□ 0.11
RIPK2O43353 HIST3H2BA-201ENST00000436555 524 ntBASIC15.73■□□□□ 0.11
RIPK2O43353 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 FAM86C2P-203ENST00000528684 1004 ntBASIC15.73■□□□□ 0.11
RIPK2O43353 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.73■□□□□ 0.11
RIPK2O43353 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.73■□□□□ 0.11
RIPK2O43353 AC091812.2-201ENST00000619081 385 ntBASIC15.73■□□□□ 0.11
RIPK2O43353 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RIPK2O43353 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.73■□□□□ 0.11
RIPK2O43353 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.73■□□□□ 0.11
RIPK2O43353 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RIPK2O43353 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.73■□□□□ 0.11
RIPK2O43353 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
RIPK2O43353 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.73■□□□□ 0.11
RIPK2O43353 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RIPK2O43353 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RIPK2O43353 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RIPK2O43353 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RIPK2O43353 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.72■□□□□ 0.11
RIPK2O43353 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RIPK2O43353 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RIPK2O43353 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.72■□□□□ 0.11
RIPK2O43353 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.72■□□□□ 0.11
RIPK2O43353 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RIPK2O43353 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.72■□□□□ 0.11
RIPK2O43353 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RIPK2O43353 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RIPK2O43353 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.72■□□□□ 0.11
RIPK2O43353 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.72■□□□□ 0.11
RIPK2O43353 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.72■□□□□ 0.11
RIPK2O43353 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.72■□□□□ 0.11
RIPK2O43353 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.72■□□□□ 0.11
RIPK2O43353 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.72■□□□□ 0.11
RIPK2O43353 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.72■□□□□ 0.11
RIPK2O43353 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.72■□□□□ 0.11
RIPK2O43353 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
RIPK2O43353 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RIPK2O43353 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.72■□□□□ 0.11
RIPK2O43353 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RIPK2O43353 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.72■□□□□ 0.11
RIPK2O43353 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RIPK2O43353 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.72■□□□□ 0.11
RIPK2O43353 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RIPK2O43353 AC138969.3-201ENST00000546612 1459 ntBASIC15.71■□□□□ 0.11
RIPK2O43353 AC138932.2-201ENST00000548268 1459 ntBASIC15.71■□□□□ 0.11
RIPK2O43353 AC126755.4-201ENST00000549796 1459 ntBASIC15.71■□□□□ 0.11
RIPK2O43353 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.71■□□□□ 0.11
RIPK2O43353 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RIPK2O43353 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
RIPK2O43353 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.71■□□□□ 0.11
RIPK2O43353 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RIPK2O43353 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RIPK2O43353 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms