Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC13.52□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 NEK4P2-201ENST00000580004 1012 ntBASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC073912.3-201ENST00000624414 853 ntBASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 KRT18P22-201ENST00000402024 1347 ntBASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AC010536.1-201ENST00000538868 2611 ntBASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AL031719.1-201ENST00000623365 2587 ntBASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 AP000437.1-201ENST00000624057 2085 ntBASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BOLA2-SMG1P6H3BVE0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms