Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 FO393414.2-201ENST00000405153 598 ntBASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 TARDBPP1-201ENST00000442013 1203 ntBASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 AC055717.3-201ENST00000622967 595 ntBASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM49D1C9J1S8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 MCCD1P2-201ENST00000423228 335 ntBASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 ACTG1P14-201ENST00000446382 1122 ntBASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 MTHFR-210ENST00000641407 2387 ntBASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM49D1C9J1S8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 AC007326.2-201ENST00000624224 7579 ntBASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 SBF1P1-201ENST00000444527 5631 ntBASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM49D1C9J1S8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms