Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 ABHD17AP1-201ENST00000358206 933 ntBASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 REXO1L3P-201ENST00000622202 1288 ntBASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 CES1P1-201ENST00000421606 1704 ntBASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 MEX3B-202ENST00000558133 4333 ntBASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 PMPCAP1-201ENST00000508114 1576 ntBASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 HMGA1P5-201ENST00000412453 271 ntBASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 ECEL1P3-201ENST00000427961 737 ntBASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 AL365330.1-201ENST00000607459 531 ntBASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 AP000525.1-201ENST00000608286 694 ntBASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAPPC1Q9Y5R8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms