Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 AZGP1P1-201ENST00000411909 902 ntBASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 TFAMP1-201ENST00000412727 736 ntBASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 RN7SL589P-201ENST00000481268 310 ntBASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AC117489.1-201ENST00000625169 3217 ntBASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AL671277.1-201ENST00000429656 993 ntBASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 PENK-208ENST00000523051 772 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 FAM86C2P-203ENST00000528684 1004 ntBASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AC145285.3-201ENST00000564603 959 ntBASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AP000842.3-202ENST00000569238 1080 ntBASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 RN7SL510P-201ENST00000581311 263 ntBASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms