Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 AC244093.1-201ENST00000610837 814 ntBASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDZRN3Q9UPQ7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 FAM86LP-201ENST00000478302 853 ntBASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 AC068587.3-201ENST00000526613 355 ntBASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 LINC01115-203ENST00000606068 577 ntBASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDZRN3Q9UPQ7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 AL513477.1-201ENST00000602865 2407 ntBASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDZRN3Q9UPQ7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms