Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.92□□□□□ -0.02
LRIT1Q9P2V4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LRIT1Q9P2V4 AC127383.1-201ENST00000444697 1800 ntBASIC14.92□□□□□ -0.02
LRIT1Q9P2V4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT1Q9P2V4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT1Q9P2V4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRIT1Q9P2V4 AHCYP2-201ENST00000430630 1300 ntBASIC14.92□□□□□ -0.02
LRIT1Q9P2V4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.92□□□□□ -0.02
LRIT1Q9P2V4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT1Q9P2V4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 AC108725.1-201ENST00000495472 409 ntBASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 AC004066.1-201ENST00000502488 802 ntBASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 PAUPAR-201ENST00000630360 2965 ntBASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.91□□□□□ -0.02
LRIT1Q9P2V4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 AC084364.1-201ENST00000551967 1556 ntBASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 LRRC59-203ENST00000576448 1531 ntBASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT1Q9P2V4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
LRIT1Q9P2V4 KRT8P44-201ENST00000441609 1350 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms