Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 AC092127.1-201ENST00000567093 3455 ntBASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 AL138725.1-201ENST00000407347 1314 ntBASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 AL137783.1-201ENST00000623494 1896 ntBASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 AC244394.1-201ENST00000435000 1665 ntBASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 Z98259.2-201ENST00000641583 609 ntBASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 AL008718.2-201ENST00000609206 1313 ntBASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC52A1Q9NWF4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 AC020910.5-201ENST00000623668 1865 ntBASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 NPM1P43-201ENST00000558669 786 ntBASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 COX6A1P2-201ENST00000620597 330 ntBASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 AC024909.3-201ENST00000611513 2257 ntBASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC52A1Q9NWF4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.07
SLC52A1Q9NWF4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SLC52A1Q9NWF4 SUPT20HL2-201ENST00000486479 2409 ntBASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 AC006058.4-201ENST00000624016 1670 ntBASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms