Protein–RNA interactions for Protein: Q9NRG1

PRTFDC1, Phosphoribosyltransferase domain-containing protein 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTFDC1Q9NRG1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PRTFDC1Q9NRG1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PRTFDC1Q9NRG1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PRTFDC1Q9NRG1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 C18orf15-201ENST00000623680 2534 ntBASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 KRT8P22-201ENST00000562317 1415 ntBASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 RN7SL752P-201ENST00000463779 287 ntBASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AC011495.1-201ENST00000498085 584 ntBASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 GAPDHP40-201ENST00000505218 1006 ntBASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AC124283.3-201ENST00000570869 594 ntBASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 AC112693.3-201ENST00000624819 1983 ntBASIC14.53□□□□□ -0.08
PRTFDC1Q9NRG1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRTFDC1Q9NRG1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 AL162726.2-201ENST00000438986 1017 ntBASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 AC004066.1-201ENST00000502488 802 ntBASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRTFDC1Q9NRG1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms