Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 ACE3P-201ENST00000423435 1973 ntBASIC14.81□□□□□ -0.04
BRF2Q9HAW0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.81□□□□□ -0.04
BRF2Q9HAW0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 FAM45BP-202ENST00000592932 1624 ntBASIC14.81□□□□□ -0.04
BRF2Q9HAW0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 FGD5P1-202ENST00000614866 2498 ntBASIC14.81□□□□□ -0.04
BRF2Q9HAW0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 CICP24-201ENST00000605464 2705 ntBASIC14.8□□□□□ -0.04
BRF2Q9HAW0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 REXO1L4P-201ENST00000605109 1937 ntBASIC14.8□□□□□ -0.04
BRF2Q9HAW0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 AJ011931.1-201ENST00000618749 2492 ntBASIC14.8□□□□□ -0.04
BRF2Q9HAW0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 AC055876.3-201ENST00000431496 288 ntBASIC14.8□□□□□ -0.04
BRF2Q9HAW0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 AC138649.4-201ENST00000612222 287 ntBASIC14.8□□□□□ -0.04
BRF2Q9HAW0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 CICP23-201ENST00000605013 2741 ntBASIC14.8□□□□□ -0.04
BRF2Q9HAW0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRF2Q9HAW0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms