Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 RPL37AP1-201ENST00000412502 279 ntBASIC14.3□□□□□ -0.12
TRIM2Q9C040 AC107890.1-201ENST00000422478 521 ntBASIC14.3□□□□□ -0.12
TRIM2Q9C040 AC055876.3-201ENST00000431496 288 ntBASIC14.3□□□□□ -0.12
TRIM2Q9C040 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.3□□□□□ -0.12
TRIM2Q9C040 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 RNA5SP421-201ENST00000516864 134 ntBASIC14.3□□□□□ -0.12
TRIM2Q9C040 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 AC138649.4-201ENST00000612222 287 ntBASIC14.3□□□□□ -0.12
TRIM2Q9C040 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM2Q9C040 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM2Q9C040 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 MIR943-201ENST00000401286 94 ntBASIC14.29□□□□□ -0.12
TRIM2Q9C040 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AC093214.1-201ENST00000511688 1107 ntBASIC14.29□□□□□ -0.12
TRIM2Q9C040 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AC140878.1-201ENST00000565277 250 ntBASIC14.29□□□□□ -0.12
TRIM2Q9C040 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AC025048.3-201ENST00000590609 569 ntBASIC14.29□□□□□ -0.12
TRIM2Q9C040 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AC005702.4-201ENST00000618393 416 ntBASIC14.29□□□□□ -0.12
TRIM2Q9C040 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.29□□□□□ -0.12
TRIM2Q9C040 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRIM2Q9C040 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM2Q9C040 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms