Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MYO15B-237ENST00000642007 4893 ntBASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 AC005034.1-201ENST00000426657 489 ntBASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 AL158211.3-201ENST00000607385 239 ntBASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
FOXP3Q9BZS1 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 MIR346-201ENST00000362234 95 ntBASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 LINC02560-201ENST00000596379 459 ntBASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 OR2I1P-210ENST00000642037 4691 ntBASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXP3Q9BZS1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 AC084364.1-201ENST00000551967 1556 ntBASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 AC092580.3-201ENST00000430932 139 ntBASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 AC244107.1-201ENST00000442033 332 ntBASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 AL035252.4-201ENST00000624174 288 ntBASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 AC008761.3-201ENST00000624803 892 ntBASIC16.02■□□□□ 0.16
FOXP3Q9BZS1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms