Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 NQO2-204ENST00000380454 851 ntTSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AC026884.1-201ENST00000418296 457 ntBASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AC104961.1-201ENST00000427605 771 ntBASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 RNA5SP406-201ENST00000516106 112 ntBASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 TPST2P1-201ENST00000564073 1102 ntBASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 MIR6720-201ENST00000611664 98 ntBASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AL592424.1-201ENST00000563624 1536 ntBASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
COL25A1Q9BXS0 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC15.21■□□□□ 0.02
COL25A1Q9BXS0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
COL25A1Q9BXS0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
COL25A1Q9BXS0 TNXA-203ENST00000507684 2038 ntBASIC15.21■□□□□ 0.02
COL25A1Q9BXS0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 SAP18P2-201ENST00000434334 459 ntBASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 ALG1L15P-201ENST00000482834 794 ntBASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 AC008026.2-201ENST00000495438 348 ntBASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 RN7SL440P-201ENST00000577855 343 ntBASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL25A1Q9BXS0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 MIR611-201ENST00000384869 67 ntBASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 HLA-DMA-202ENST00000395303 1007 ntBASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 PGAM1P11-201ENST00000416729 680 ntBASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 AL954722.1-201ENST00000431238 259 ntBASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 AC131235.2-201ENST00000445553 1057 ntBASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms