Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AC093724.1-201ENST00000448659 1027 ntBASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 GAPDHP21-201ENST00000450301 1010 ntBASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AL079307.3-201ENST00000556114 283 ntBASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AC024267.1-201ENST00000582320 895 ntBASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AL844908.2-201ENST00000609461 460 ntBASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AL662799.1-202ENST00000614205 422 ntBASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AL512652.2-201ENST00000625156 1716 ntBASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AC068587.6-202ENST00000641839 5619 ntBASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 AC148477.4-201ENST00000613430 1793 ntBASIC13.94□□□□□ -0.18
TRAF4Q9BUZ4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 AL080243.2-201ENST00000418783 582 ntBASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 AC009407.1-201ENST00000568958 598 ntBASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 AC025048.6-201ENST00000634326 1161 ntBASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 MBLAC2-202ENST00000514906 1936 ntBASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAF4Q9BUZ4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms